I've got an RV-7 tip-up that I've opened and closed, well, let's see... I'm guessing 3000 times. Here is a "damage report" after 1061 hours of flying:
The back edge of the plexi of the canopy bubble is chafed a bit where it contacts the roll bar. The paint on the roll bar has worn off in spots. I used some strips of UHMW tape in the highest wear spots.
There is some wear in the lower aft corners like you mentioned -- and the paint has worn off along the roll bar where the plexi rubs on its way down.
I have some light wear on the top of the roll bar where the steel handle rests in the "slightly ajar" position.
I have some scratches on the front face of the roll bar where, on rare occasion, I wasn't careful enough to leave the handle perpendicular when placing the canopy "ajar," and the canopy dropped closed...the steel handle end scraping the roll bar on its way down.
In general I'm very careful with the canopy. I have no cracks or broken-off pieces. The canopy corners tuck nicely into the little "slots" formed between the turtle deck skin front ends and the roll bar. I thought I might have to chop off the corners of the canopy like some builders have done, but that proved completely unnecessary. I also thought those little flaps of turtle deck skin which stick up and out would be very prone to catching on clothes or bags and getting pulled/bent out. They have not.
I do NOT have any guides of any sort. I do however have the canopy stiffener kit from Van's (3 pieces that rivet to the front of the frame).
Just wanted to give you a data point on a canopy that has been "operated" literally thousands of times with no major issues. It sounds like you're assuming your canopy will endure some kind of damage if you build it to plans. I don't think that's the case.