I personally like it attached to the floor. Since my garage floor isn't really level and flat, moving the jig could cause things to twist as the jig's feet find new positions.
I did avoid drilling holes in the floor by doing the following: After the jig is built, turn it over and screw a square foot of plywood to the bottom of each jig foot. Clean the floor real well and run a nice bead of liquid nails all over the bottom of the plywood. Flip it over, put something heavy on top of each leg and wait a day. It'll stay put real well, but can easily be pried off the floor when you're done.