Drop me a note offline. We can draw you up a nice big drawing with all the interconnects on it printed on a nice big sheet of paper.
It's not difficult to do, but it's much easier if you can see the entire interconnect of all the units on one big 3' sheet instead of trying to decipher all the various interconnects between each manual and pinouts. You have interconnects between the 430W, AFS, Audio panel, Transponder (maybe an autopilot), etc.. Almost everything talks to everything - it's not a straight forward one unit to the next.
Also, if you haven't bought the GMA-340 yet, I might encourage you to reconsider....
Cheers,
Stein