I'm at the same step...just disassembled everything

to get it prepped for final assembly/riveting
Drilled the side and bottom skins to the firewall and firewall angle/stiffeners once everything was all in place and in final position. I have the finish kit, so we used the engine mount to ensure the firewall was perfectly flat (or at least, that we won't have to use any washers or shims to bolt the motor mount on).
In the middle of countersinking and such now...countersinking all the stiffeners and longerons, dimpling the skins (including bottom skin). Unless it's > .040", I prefer to dimple if possible.
Don't know about that other part...in any case, I'm trying to defer drilling anything to or through the firewall until later, so I can be sure it's in the absolutely best or correct position. Maybe this will bite me later and make something harder to do, dunno...but I just don't like drilling holes for things that aren't there yet

unless I have to.