Personally, I would not worry about bearing damage from turning the crank with no torque on the thru studs. I would worry about bearing damage from increased crush on them from a fretted case getting retorqued and producing more crush on the bearing clearance because you are taking up the space from the case fretting. You can check the running clearance by torqueing up the thru stud you loosened taking the cylinder off and making sure the engine isn't tighter than with them un torqued. If the engine gets significantly tighter when the thru stud is torqued up, you have more issues that just a cylinder replacement!
With the history of these engines fretting crankcases, I made it SOP to do a running clearance check, as described, every time I un-torqued a cylinder or cylinders.
Good Luck,
Mahlon
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