Anyone can do anything to a homebuilt experimental (repairs, maintenance, mods, etc), *except* the annual condition inspection, which must be done either by the builder holding the 'repairman's certificate', or the holder of at least an A&P ticket.
So you can do pretty much anything you want, then submit a letter (usually a fax) to your FSDO stating that you need to return the plane to phase one for testing and requesting a test area. After flying the tests, you make a log book entry detailing results of the tests and new limits, if any. The exact procedures/requirements vary slightly depending on when the oplims were issued (various versions have been used over the years), but that's basically all there is to it.
Having said that, if you really aren't familiar with the plane, its construction, etc, getting help from someone with experience would be smart, for safety and to help the process go more smoothly. There should be someone in a local EAA chapter that would be willing to help you.